How to use these notes

Read the explanation first, then look at the example and laboratory connection. After that, try the Quick Check without opening the answer. If you can explain the result in your own words, you have understood more than if you have only memorised the definition.

Some sections also contain common mistakes. These are included because closely related terms are often confused in first-year examinations and practical classes.

Topic 01

History and Development of Microbiology

What is microbiology?

Microbiology is the study of microorganisms and other microscopic biological agents. It includes their structure, growth, physiology, genetics, classification, interactions with hosts and applications in medicine, food, agriculture, industry and environmental science.

Microorganisms are not simply disease-causing organisms. Many are essential to nutrient cycling, food production and biotechnology. A useful first-year distinction is therefore: microbial life can be harmful, useful or simply part of the normal environment.

Important developments

Scientist Important contribution Why it matters
Antonie van Leeuwenhoek Observed microorganisms using microscopes he constructed. Provided early direct observations of the microbial world.
Louis Pasteur Supported the role of microorganisms in fermentation and helped disprove spontaneous generation. Connected microorganisms with biological processes and disease.
Robert Koch Developed important methods for linking particular microorganisms with particular diseases. Helped establish medical bacteriology.
Joseph Lister Applied germ theory to surgical practice and antisepsis. Reduced infection associated with surgery.
Edward Jenner Introduced an early successful vaccination approach against smallpox. Important milestone in preventive medicine.
Real microbiology example

Pasteur's work is easier to remember when connected to food. If a sugary liquid changes because microorganisms metabolise its contents, the change is biological rather than simply a chemical event occurring for no reason. Fermentation studies helped show that specific microorganisms could be associated with specific processes.

Think about this

Suppose a sealed nutrient liquid remains clear while an contaminated sample becomes turbid. What does this tell you? Turbidity by itself does not identify the organism, but it provides evidence that microbial growth has occurred in the sample.

Common mistake

Do not write that Pasteur and Koch made the microscope. Their contributions came later and were related mainly to germ theory, fermentation, disease causation and microbiological methods.

Quick Check

Who is associated with early microscopic observation of microorganisms?

Antonie van Leeuwenhoek.

Why was Pasteur's work important to microbiology?

His work provided strong evidence for the role of microorganisms in fermentation and helped disprove spontaneous generation.

Topic 02

Classification and Nomenclature of Microorganisms

Why classify microorganisms?

The microbial world contains organisms with very different structures, nutritional requirements and genetic characteristics. Classification provides a system for arranging organisms according to shared characteristics and evolutionary relationships.

Major cellular groups

Group Cell type Example
Bacteria Prokaryotic Escherichia coli
Archaea Prokaryotic Methanogenic archaea
Fungi Eukaryotic Saccharomyces cerevisiae
Protozoa Eukaryotic Entamoeba histolytica
Algae Mostly eukaryotic Chlorella
Viruses Acellular Influenza virus

Binomial nomenclature

Scientific names normally contain two parts: the genus name followed by the species name.

Genus + species = scientific name

For example: Escherichia coli. The genus begins with a capital letter, while the species name begins with a lowercase letter. When typed, the complete scientific name is normally italicised.

A useful comparison

"E. coli" and "Gram-negative rod" do not mean the same thing. E. coli identifies a particular organism, while Gram-negative rod describes characteristics that can be shared by many different bacteria.

Laboratory connection

A bacterial isolate may first be described using observations such as colony appearance, Gram reaction and cell shape. These observations narrow the possibilities but may not by themselves establish the species identity.

Common mistake

Classification is not simply memorising names. If you are asked to compare two organisms, include the characteristic used for the comparison instead of listing only their names.

Quick Check

What is the correct order in a binomial scientific name?

Genus followed by species.

Does "Gram-negative rod" identify one bacterial species?

No. It describes staining reaction and shape and can apply to many different bacterial species.

Topic 03

Scope and Applications of Microbiology

Microbiology in different fields

Microbiology connects laboratory science with many practical areas. The same basic microbial principles can be used in medicine, agriculture, food production, environmental studies and industry.

Area Application Example
Medical microbiology Study of infectious agents and laboratory diagnosis. Identification of bacterial pathogens.
Food microbiology Study of useful and harmful microorganisms in food. Fermentation and food spoilage.
Agricultural microbiology Study of microorganisms associated with soil and plants. Nitrogen-fixing bacteria.
Environmental microbiology Study of microorganisms in natural environments. Microbial decomposition.
Industrial microbiology Use of microorganisms to produce useful products. Production of antibiotics or enzymes.
One organism, different importance

Yeasts are a good example of why microorganisms should not simply be divided into "good" and "bad." Saccharomyces cerevisiae can be used in bread and beverage fermentation, while another microbial species may be associated with disease or spoilage.

Apply the concept

If a microorganism is found degrading organic material in soil, environmental microbiology is relevant. If a related process is deliberately used to produce a commercial enzyme, industrial microbiology becomes relevant.

Quick Check

Which branch studies microorganisms associated with food?

Food microbiology.

Why is microbiology important in agriculture?

Microorganisms influence soil fertility, nutrient cycling, decomposition, plant health and processes such as nitrogen fixation.

Topic 04

Morphology and Structure of Bacteria

Common bacterial shapes

Bacterial morphology refers to the observable form and arrangement of bacterial cells. Shape is useful during preliminary laboratory observation, although shape alone is rarely enough to identify a bacterial species.

Shape Description Example
Coccus Spherical or nearly spherical cells. Staphylococcus aureus
Bacillus Rod-shaped cells. Escherichia coli
Vibrio Curved or comma-shaped rod. Vibrio cholerae
Spirillum Rigid spiral-shaped cells. Spirillum species
Spirochete Thin flexible spiral-shaped cells. Treponema species

Important bacterial structures

  • Cell wall: provides structural strength and helps maintain cell shape.
  • Cell membrane: controls movement of substances and contains important transport and energy-related functions.
  • Cytoplasm: contains enzymes, ribosomes and other cellular components.
  • Nucleoid: region containing the main bacterial chromosome.
  • Ribosomes: involved in protein synthesis.
  • Capsule or slime layer: may help some bacteria attach to surfaces and avoid host defence mechanisms.
  • Flagella: associated with bacterial motility.
  • Fimbriae or pili: can contribute to attachment and, in some bacteria, genetic exchange.
  • Endospores: highly resistant structures formed by some bacteria such as Bacillus and Clostridium.
Example: Staphylococcus aureus

Staphylococcus aureus is a useful example when studying cocci in clusters. The name and the observed arrangement should not be confused with the Gram reaction. In a Gram stain, S. aureus is characteristically observed as Gram-positive cocci arranged in clusters.

Laboratory connection: Gram staining

A purple Gram-positive result is not simply a colour label. It reflects the ability of the bacterial cell envelope to retain the primary stain-iodine complex during the decolorisation step. Gram-negative bacteria do not retain the complex in the same way and therefore take up the counterstain.

Common mistake

Do not write "all cocci are Gram-positive" or "all rods are Gram-negative." Shape and Gram reaction describe different characteristics.

Quick Check

What is the difference between shape and Gram reaction?

Shape describes the physical form of the cell, such as coccus or rod. Gram reaction describes how the cell responds to the Gram staining procedure.

Which bacterial structures are associated with motility?

Flagella are the main structures associated with bacterial motility.

Topic 05

Growth and Physiology of Bacteria

What does bacterial growth mean?

In microbiology, growth generally refers to an increase in the number of cells rather than simply an increase in the size of one cell. Under suitable conditions, bacterial cells divide and produce a population.

Bacterial growth curve

Phase What happens
Lag phase Cells adapt to the new environment and prepare for active growth.
Log phase Cells divide rapidly and the population increases at a high rate.
Stationary phase Growth slows because nutrients become limited and waste products accumulate.
Death phase Viable cells decline when unfavourable conditions persist.

Generation time

Generation time is the time required for a population to double under a particular set of conditions.

Faster generation time = faster population increase
Example: growth in a nutrient medium

If a bacterial culture is transferred to a fresh suitable medium, there may be an initial period with little visible change. This does not necessarily mean that the cells are inactive. They may be adapting to the new conditions before entering rapid multiplication.

Oxygen requirement

Type Relationship with oxygen
Obligate aerobe Requires oxygen for growth.
Obligate anaerobe Oxygen is harmful or not tolerated.
Facultative anaerobe Can grow with or without oxygen, often growing better when oxygen is available.
Microaerophile Requires oxygen at lower concentrations than atmospheric levels.
Aerotolerant anaerobe Does not use oxygen for energy generation but tolerates its presence.
Interpret a tube with an oxygen gradient

If growth appears mainly near the top, the organism may require oxygen. If growth occurs throughout but is heavier near the top, a facultative anaerobe is a possible interpretation. If growth occurs throughout with little difference between the top and bottom, aerotolerance may be considered.

Common mistake

The stationary phase does not mean that every cell has suddenly stopped functioning. Cells can remain metabolically active even when the total population shows little net increase.

Quick Check

Which phase shows the most rapid population increase?

The log or exponential phase.

What does heavy growth near the top of an oxygen-gradient medium suggest?

It suggests an organism that benefits from oxygen availability, such as an obligate aerobe, depending on the complete growth pattern.

Topic 06

Isolation, Enumeration and Culture of Bacteria

Why isolate microorganisms?

A natural specimen may contain many microorganisms at the same time. If the purpose is to study one organism, it must be separated from the mixed population and obtained as an isolated culture.

Pure culture and mixed culture

Culture Meaning
Pure culture Contains one microbial type under the conditions used for observation.
Mixed culture Contains more than one microbial type.

Streak plate principle

The streak plate method is based on progressively separating cells across the surface of a solid medium. As the number of cells placed in each successive area decreases, individual cells can become separated enough to form individual colonies.

Mixed cells
→
Progressive separation
→
Separated cells
→
Colonies
Why colonies matter

A colony is visible because many cells have multiplied from an initially small number of cells or a cell-containing unit. Colony morphology can provide useful preliminary information, such as size, shape, margin, elevation and pigmentation.

Laboratory connection

When examining a culture plate, do not immediately identify an organism from colony colour alone. A careful observation combines colony characteristics with microscopy, staining and appropriate identification tests.

Enumeration

Enumeration means estimating the number of microorganisms present in a sample. Viable counts are often expressed as colony-forming units rather than simply as individual cells because one colony may arise from more than one cell.

CFU/mL = Number of colonies × dilution factor ÷ volume plated (mL)
Calculation example

Suppose a plate contains 85 colonies, the dilution represented by the plate is 10-4, and 0.1 mL was plated.

CFU/mL = 85 × 104 ÷ 0.1 = 8.5 × 106 CFU/mL

The volume correction is important. Forgetting the 0.1 mL factor would produce a result that is ten times too low.

Common mistakes in CFU calculations
  • Using the dilution instead of the dilution factor.
  • Forgetting to account for plated volume.
  • Writing CFU without including the volume unit.
  • Using a crowded or nearly empty plate without considering whether the count is suitable.

Quick Check

Why is the term CFU used instead of simply "cells per mL"?

Because one visible colony may originate from a cell or a group of cells capable of producing a colony.

What is the main purpose of streaking?

To progressively separate microbial cells so that isolated colonies can develop.

Topic 07

Microbial Metabolism

Meaning of metabolism

Metabolism includes the chemical reactions occurring inside a cell. These reactions provide energy, produce cellular building materials and allow microorganisms to respond to their environment.

Term Main idea
Catabolism Breakdown of molecules, often releasing energy.
Anabolism Synthesis of cellular components, requiring energy.

Respiration and fermentation

Respiration and fermentation are different ways microorganisms obtain energy. In respiration, an electron transport system is involved, whereas fermentation does not use an external electron acceptor in the same way.

Example: carbohydrate fermentation

In a carbohydrate fermentation test, a colour change may indicate acid production. A Durham tube or similar gas-detection arrangement can provide evidence of gas production. Acid and gas are separate observations and should not be treated as the same result.

Interpret the result

If the medium becomes acidic but no gas is visible, the correct interpretation is acid production without detectable gas under the test conditions. If acid and gas are both observed, both results should be reported.

Common mistake

Do not assume that fermentation always produces gas. Different organisms metabolise the same substrate differently.

Quick Check

What is the main difference between catabolism and anabolism?

Catabolism breaks molecules down and often releases energy, while anabolism builds cellular components and requires energy.

Are acid production and gas production the same observation?

No. They are separate outcomes of carbohydrate metabolism and should be interpreted separately.

Topic 08

Microbial Genetics

Basic genetic terms

  • DNA: the major hereditary material in cellular organisms.
  • Gene: a segment of genetic material associated with a functional product or characteristic.
  • Genome: the complete genetic material of an organism.
  • Mutation: a change in genetic material.
  • Plasmid: a usually circular extrachromosomal DNA molecule found in many bacteria.

Horizontal gene transfer

Bacteria can acquire genetic information from sources other than direct inheritance from a parent cell. Three important mechanisms are transformation, transduction and conjugation.

Mechanism Basic idea
Transformation Uptake of free DNA from the surrounding environment.
Transduction Transfer of bacterial genetic material through a bacteriophage.
Conjugation Transfer of genetic material through direct cell-to-cell contact, commonly involving plasmid DNA.
Why this matters in medicine

Some antibiotic-resistance genes can be carried on mobile genetic elements. This means resistance is not always a simple story of one bacterium developing a change and then passing only that change to its descendants. Genetic exchange can also contribute to the spread of resistance characteristics.

Think about this

If two bacterial populations suddenly show a similar resistance characteristic, do not automatically conclude that both populations independently developed the same mutation. Horizontal gene transfer is another possible biological explanation.

Common mistake

Transformation, transduction and conjugation are not three names for mutation. They describe different mechanisms by which genetic information can move between cells or enter a cell.

Quick Check

Which process involves a bacteriophage?

Transduction.

Which process involves uptake of free DNA?

Transformation.

Topic 09

Microscopy and Techniques for Handling Microorganisms

Why microscopy is important

Most bacterial cells are too small to be seen clearly with the naked eye. Microscopy allows students to examine cell shape, arrangement, staining reactions and other microscopic features.

Common microscopy methods

Method Useful for
Bright-field microscopy General observation of stained or naturally visible specimens.
Dark-field microscopy Viewing organisms that are difficult to observe by ordinary bright-field methods.
Phase-contrast microscopy Viewing living, relatively transparent cells without ordinary staining.
Fluorescence microscopy Detection of fluorescently labelled structures or organisms.
Electron microscopy Very high-resolution study of ultrastructural details.

Magnification and resolution

Magnification makes an object appear larger. Resolution refers to the ability to distinguish two closely spaced objects as separate. A very large image is not automatically a highly detailed image.

Total magnification = Eyepiece magnification × Objective magnification
Simple calculation

If a microscope has a 10× eyepiece and a 40× objective:

Total magnification = 10 × 40 = 400×
Laboratory connection

A microscope observation should be recorded as an observation, not as an unsupported identification. For example, "Gram-positive cocci in clusters observed" is a microscopic observation. It is stronger scientifically than immediately writing a species name without additional evidence.

Common mistake

Do not confuse magnification with resolution. Increasing magnification without sufficient resolution can simply produce a larger blurred image.

Quick Check

What is the total magnification with a 10× eyepiece and 100× objective?

1000×.

What does resolution mean?

The ability to distinguish two closely spaced objects as separate details.

Topic 10

Control of Microorganisms

Why control microorganisms?

Microbial control is important when microorganisms need to be removed, reduced or prevented from multiplying. The required level of control depends on the situation.

Term Meaning
Sterilization Destruction or removal of all forms of viable microbial life, including resistant forms where applicable.
Disinfection Reduction or destruction of harmful microorganisms on inanimate objects.
Antisepsis Use of antimicrobial chemicals on living tissue.
Sanitization Reduction of microbial numbers to a level considered acceptable by relevant standards.

Physical methods

  • Moist heat
  • Dry heat
  • Filtration
  • Radiation
  • Low temperature methods

Chemical methods

Chemical agents include alcohols, halogens, phenolic compounds, aldehydes and other disinfecting or antiseptic agents. Their effectiveness depends on concentration, contact time, microbial characteristics and environmental conditions.

Why method selection matters

A method suitable for a heat-stable metal instrument may not be suitable for a heat-sensitive material. Microbial control is therefore not simply a matter of choosing the strongest chemical or highest temperature. The material and purpose must also be considered.

Common mistake

Sterilization and disinfection are not synonyms. Sterilization aims at complete elimination of viable microorganisms, while disinfection has a different scope and is generally applied to inanimate surfaces.

Quick Check

Which term applies to antimicrobial treatment of living tissue?

Antisepsis.

Is disinfection the same as sterilization?

No. Sterilization aims to eliminate all viable microbial life, whereas disinfection is intended to reduce or destroy harmful microorganisms on inanimate objects.

Topic 11

Host-Parasite Interaction

Host and parasite

A host is an organism that provides an environment in which another organism can live. In medical microbiology, the term parasite is commonly used for an organism that obtains resources from a host and may cause harm.

Normal microbiota

Microorganisms normally associated with healthy body sites are often referred to as normal microbiota. Their presence does not automatically mean disease.

Example: normal microbiota versus pathogen

Finding bacteria on a body surface is not automatically evidence of infection. The site, organism, quantity, host condition and clinical context all influence interpretation.

Important terms

Term Meaning
Pathogen A microorganism capable of causing disease.
Opportunistic pathogen Can cause disease particularly when host defences or normal barriers are compromised.
Infection Entry and multiplication of an infectious agent in a host.
Disease A condition in which infection or another cause produces abnormal signs or symptoms.
Virulence The degree of pathogenicity or disease-producing capacity of an organism or strain.
Think about this

Infection and disease are related but are not identical terms. A microorganism may enter and multiply in a host without producing obvious disease in every situation.

Common mistake

Do not write that every microorganism found on or in the human body is a pathogen. Normal microbiota are an important part of the microbial environment of the body.

Quick Check

Does the presence of a microorganism always mean disease?

No. The organism may be part of the normal microbiota, may cause colonisation without disease, or may be an opportunistic organism whose significance depends on the host and site.

What is an opportunistic pathogen?

An organism that can cause disease especially when normal host defences are weakened or barriers are disrupted.

Topic 12

Introduction to Virology

What are viruses?

Viruses are acellular infectious agents consisting of genetic material enclosed by a protein coat. Some viruses also possess a lipid envelope. They depend on host cells for replication.

Basic viral components

  • Genome: DNA or RNA containing viral genetic information.
  • Capsid: protein coat surrounding the viral genome.
  • Envelope: lipid-containing outer layer present in some viruses.
  • Surface proteins: may help a virus attach to host cells.
Feature Virus Bacterium
Cellular? No Yes
Independent cellular metabolism? No Yes
Genetic material DNA or RNA DNA
Replication Requires host cell machinery Cell division
Example: influenza virus

Influenza virus contains RNA as its genetic material and has an envelope. Viral surface proteins participate in attachment and entry into host cells. These structural features are useful when understanding why viral structure matters to infection.

Why antibiotics do not treat viral infections

Antibiotics are designed to target bacterial structures or processes. Viruses do not have bacterial cell walls, bacterial ribosomes or independent bacterial metabolism. Therefore, antibacterial antibiotics do not directly target viruses in the same way they target bacteria.

Common mistake

Do not describe a virus as a small bacterium. Viruses are fundamentally different because they are acellular and depend on host cells for replication.

Quick Check

Do all viruses contain both DNA and RNA?

No. A virus has either DNA or RNA as its genome.

Why must viruses use host cells?

They lack the complete cellular machinery required for independent replication.

Topic 13

Introduction to Parasitology

What is parasitology?

Parasitology is the study of parasites, their hosts and the relationships between them. Medical parasitology commonly deals with protozoa and helminths of importance to humans.

Group General feature Example
Protozoa Microscopic unicellular eukaryotic organisms. Entamoeba histolytica
Nematodes Roundworms. Ascaris lumbricoides
Cestodes Tapeworms. Taenia species
Trematodes Flukes. Fasciola species

Host terminology

  • Definitive host: host in which the adult parasite or sexual stage develops, depending on the parasite.
  • Intermediate host: host supporting a developmental or larval stage.
  • Reservoir host: host that can maintain an infectious agent and serve as a source of infection.
  • Vector: an organism that transmits an infectious agent between hosts.
Example: parasite life cycles

A parasite may require more than one host to complete its life cycle. This is why identifying the host associated with a particular developmental stage is often more useful than trying to memorise the entire life cycle as one long paragraph.

Study tip

When learning a parasite, organise your notes under the same headings each time: habitat, infective stage, mode of transmission, diagnostic stage, major disease and important prevention measures. This makes comparison between parasites easier.

Common mistake

A vector and an intermediate host are not automatically the same thing. A vector is defined by its role in transmission, while an intermediate host is defined by the developmental stage of the parasite that occurs within it.

Quick Check

What is a vector?

An organism that transmits an infectious agent between hosts.

What is an intermediate host?

A host in which a developmental or larval stage of a parasite occurs.

Topic 14

Introduction to Mycology

What is mycology?

Mycology is the study of fungi. Fungi are eukaryotic organisms that obtain nutrients by absorption. They include yeasts, moulds and larger multicellular forms.

Type General appearance Example
Yeast Usually unicellular; many reproduce by budding. Saccharomyces cerevisiae
Mould Filamentous growth composed of hyphae. Rhizopus species
Dimorphic fungus Can occur in different forms depending on conditions. Histoplasma species

Hyphae and mycelium

A hypha is a filamentous fungal structure. A mass or network of hyphae is called a mycelium. These terms are frequently used when describing moulds.

Example: yeast versus mould

A yeast colony may appear smooth and creamy, while a mould colony may develop a filamentous or cottony appearance. Colony appearance is useful as a preliminary observation but should be supported by microscopic and other appropriate characteristics.

Laboratory connection

When observing a suspected fungal culture, students should record visible features such as texture, pigmentation and surface appearance, followed by appropriate microscopic observations. A description is different from a final identification.

Common mistake

Do not use "fungus" and "bacterium" as interchangeable terms. Fungi are eukaryotic, whereas bacteria are prokaryotic.

Quick Check

What is a hypha?

A filamentous fungal structure.

What is a mycelium?

A mass or network of fungal hyphae.

How to build a good examination answer

A longer answer should contain more than a longer definition. The marks should be supported by organised information.

For a 2-mark question

Give the direct definition or statement first. Add one important characteristic or example if appropriate.

For a 5-mark question

Start with a short definition or introduction, then use clear headings or numbered points. Include an example, comparison or simple diagram where it actually helps.

For a 10-mark question

Begin with the definition or introduction, then develop the answer under logical headings. Include classification, mechanism, important characteristics, examples and a suitable table or labelled diagram where relevant. End with a short concluding statement.

Example: "Explain the bacterial growth curve"

A strong long answer should not simply list lag, log, stationary and death phases. Explain what happens in each phase and connect the changes with nutrient availability, cell division and accumulation of waste products.

Practical interpretation: observe before you identify

One useful habit in microbiology is to separate an observation from an interpretation and from a final identification.

Level Example
Observation Purple spherical cells are seen in clusters.
Interpretation Gram-positive cocci in clusters.
Further identification Additional tests would be used before identifying a particular species.

This distinction is useful in practical classes and also makes written answers more scientifically accurate.

Commonly confused terms

Do not confuse Difference
Magnification vs resolution Magnification enlarges an image; resolution determines the ability to distinguish close details.
Infection vs disease Infection involves entry and multiplication; disease refers to the resulting abnormal condition.
Sterilization vs disinfection Sterilization aims at complete elimination of viable microbial life; disinfection has a narrower purpose.
Shape vs Gram reaction Shape describes morphology; Gram reaction describes staining behaviour.
Mutation vs horizontal gene transfer Mutation changes genetic material; horizontal gene transfer moves genetic information between cells.
Yeast vs mould Yeasts are generally unicellular; moulds are filamentous.
Vector vs intermediate host Vector is defined by transmission; intermediate host is defined by parasite development.
Virus vs bacterium Viruses are acellular and require host cells for replication; bacteria are cellular organisms.

Final Revision Checklist

Before an examination, make sure you can explain these points without looking at the notes.

History
Explain the major contributions of Leeuwenhoek, Pasteur, Koch, Lister and Jenner.
Classification
Distinguish bacteria, archaea, fungi, protozoa and viruses.
Bacterial structure
Explain cell wall, membrane, capsule, flagella, pili, ribosomes and endospores.
Growth
Draw and explain the four phases of the bacterial growth curve.
Oxygen requirement
Compare obligate aerobes, obligate anaerobes, facultative anaerobes, microaerophiles and aerotolerant anaerobes.
Isolation
Explain the principle of obtaining isolated colonies from a mixed population.
Enumeration
Use the CFU/mL formula and correctly handle dilution factor and plated volume.
Metabolism
Distinguish catabolism, anabolism, respiration and fermentation.
Genetics
Compare transformation, transduction and conjugation.
Microscopy
Distinguish magnification from resolution and calculate total magnification.
Microbial control
Distinguish sterilization, disinfection, antisepsis and sanitization.
Host interaction
Distinguish pathogen, opportunistic pathogen, infection, disease and virulence.
Virology
Explain viral genome, capsid, envelope and dependence on host cells.
Parasitology
Distinguish definitive host, intermediate host and vector.
Mycology
Distinguish yeast, mould, hypha and mycelium.
Practical reasoning
Separate what you observe from what you interpret and what you finally identify.

A final study note

Microbiology becomes easier when you stop treating every topic as a separate list of facts. Try to connect structure with function, function with growth, growth with laboratory observation and laboratory observation with interpretation.

For example, the structure of a bacterial cell helps explain Gram staining; growth requirements help explain culture results; metabolism helps explain biochemical reactions; and genetics helps explain how microbial characteristics can change or spread.

When revising, practise explaining these connections in your own words. That is especially useful for 5-mark and 10-mark answers.